This scenario portrays a healthy adult undergoing a voluntary genetic wellness screening offered as part of preventive care. A blood sample is collected and characterized, DNA is sequenced, and the resulting molecular and substance-related resources describe the specimen chain and analytical outputs. Findings are framed as reassuring: no clinically significant risk factors are highlighted in the test narrative.
from zato_fhir.test.r4.v1 import Scenarios, TestData
for instance in Scenarios.genomics:
patient = instance.patient
for name in patient.name:
print(name.text)
ms = instance.molecular_sequence
print(ms.type_)
bdp = instance.biologically_derived_product
print(bdp.productCode)
bs = instance.body_structure
print(bs.active)
sna = instance.substance_nucleic_acid
print(sna.id)
sp = instance.substance_polymer
print(sp.id)
spr = instance.substance_protein
print(spr.id)
sri = instance.substance_reference_information
print(sri.id)
ssm = instance.substance_source_material
print(ssm.id)
sspec = instance.substance_specification
print(sspec.id)This scenario portrays a healthy adult undergoing a voluntary genetic wellness screening offered as part of preventive care. A blood sample is collected and characterized, DNA is sequenced, and the resulting molecular and substance-related resources describe the specimen chain and analytical outputs. Findings are framed as reassuring: no clinically significant risk factors are highlighted in the test narrative.
The bundle exercises several specialized genomics and substance resource types together, supporting validation of pipelines that ingest sequencing results, derived products, and reference substance metadata. It remains suitable for demos and integration tests that require a complete, positive-outcome genomics story without pathogenic variant reporting or urgent follow-up.
10 resources per instance, 100 total across 10 instances.
| FHIR resource type | Role in this scenario |
|---|---|
Patient | Person undergoing wellness genetic screening |
MolecularSequence | Sequencing read or assembly representation |
BiologicallyDerivedProduct | Blood-derived product tied to the screening specimen |
BodyStructure | Anatomical or collected-site context as modeled |
SubstanceNucleicAcid | Nucleic acid substance characterization |
SubstancePolymer | Polymer-level substance description where used |
SubstanceProtein | Protein-related substance metadata |
SubstanceReferenceInformation | Reference details for substance identification |
SubstanceSourceMaterial | Source material lineage for the analyte |
SubstanceSpecification | Specification of the substance for regulatory or lab context |
FHIR resources per instance | 10 |
Total resources (10 instances) | 100 |
Distinct resource types | 10 |
Scenario identifier | `Scenarios.genomics` |
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